Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Hyphomicrobiaceae
Genus
Hyphomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Hyphomicrobiaceae |
| Genus | Hyphomicrobium |
| Species | Hyphomicrobium denitrificans |
| Strain | ATCC 51888 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Hyphomicrobium denitrificans ATCC 51888
Accession NumberNC_014313.1
Gene Summary
Adenine Count
700565 bp
Thymine Count
725459 bp
Guanine Count
1136928 bp
Cytosine Count
1076017 bp
Genome Length
3638969 bp
Protein-coding Genes
3429 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HDEN_RS05480 | Not Available | + | 1153281 - 1153697 | 15309.3 |
| dna-packaging protein | HDEN_RS05485 | Not Available | + | 1153615 - 1155117 | 54412.8 |
| sensor histidine kinase | HDEN_RS05590 | Not Available | + | 1173613 - 1174995 | 50190.4 |
| rt0821/lpp0805 family surface protein | HDEN_RS05595 | Not Available | + | 1175196 - 1175672 | 16610.6 |
| c-type cytochrome biogenesis protein ccmi | HDEN_RS05600 | Not Available | + | 1175819 - 1177006 | 42629.0 |
| cytochrome c maturation protein ccme | HDEN_RS05605 | Not Available | + | 1177030 - 1177497 | 16383.8 |
| heme lyase ccmf/nrfe family subunit | HDEN_RS05610 | Not Available | + | 1177510 - 1179492 | 71405.3 |
| cytochrome c-type biogenesis protein ccmh | HDEN_RS05615 | Not Available | + | 1179499 - 1179969 | 16975.7 |
| do family serine endopeptidase | HDEN_RS05620 | Not Available | + | 1180132 - 1181724 | 55785.0 |
| response regulator transcription factor | HDEN_RS05625 | Not Available | + | 1181843 - 1182523 | 25318.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
