Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Hyphomicrobiaceae
Genus
Hyphomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Hyphomicrobiaceae |
| Genus | Hyphomicrobium |
| Species | Hyphomicrobium denitrificans |
| Strain | ATCC 51888 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Hyphomicrobium denitrificans ATCC 51888
Accession NumberNC_014313.1
Gene Summary
Adenine Count
700565 bp
Thymine Count
725459 bp
Guanine Count
1136928 bp
Cytosine Count
1076017 bp
Genome Length
3638969 bp
Protein-coding Genes
3429 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| serine hydroxymethyltransferase | HDEN_RS04725 | Not Available | + | 1016604 - 1017908 | 46274.5 |
| transcriptional regulator nrdr | HDEN_RS04730 | Not Available | + | 1018171 - 1018695 | 19803.6 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | HDEN_RS04735 | Not Available | + | 1018700 - 1019806 | 39216.6 |
| riboflavin synthase | HDEN_RS04740 | Not Available | + | 1019830 - 1020423 | 20949.9 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | HDEN_RS04745 | Not Available | + | 1020423 - 1021571 | 41147.5 |
| 6,7-dimethyl-8-ribityllumazine synthase | HDEN_RS04750 | Not Available | + | 1021579 - 1022082 | 17683.1 |
| transcription antitermination factor nusb | HDEN_RS04755 | Not Available | + | 1022079 - 1022591 | 19060.9 |
| thiamine-phosphate kinase | HDEN_RS04760 | Not Available | + | 1022608 - 1023633 | 35591.4 |
| murein l,d-transpeptidase | HDEN_RS04765 | Not Available | + | 1023870 - 1025228 | 50835.6 |
| lrp/asnc family transcriptional regulator | HDEN_RS04770 | Not Available | - | 1025241 - 1025720 | 17348.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
