Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Hyphomicrobiaceae
Genus
Hyphomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Hyphomicrobiaceae |
| Genus | Hyphomicrobium |
| Species | Hyphomicrobium denitrificans |
| Strain | ATCC 51888 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Hyphomicrobium denitrificans ATCC 51888
Accession NumberNC_014313.1
Gene Summary
Adenine Count
700565 bp
Thymine Count
725459 bp
Guanine Count
1136928 bp
Cytosine Count
1076017 bp
Genome Length
3638969 bp
Protein-coding Genes
3429 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| giy-yig nuclease family protein | HDEN_RS04670 | Not Available | - | 1002028 - 1002333 | 11614.0 |
| vitamin b12-dependent ribonucleotide reductase | HDEN_RS04680 | Not Available | - | 1003180 - 1006941 | 137680.0 |
| nadh:ubiquinone oxidoreductase subunit ndufa12 | HDEN_RS04685 | Not Available | + | 1007590 - 1007988 | 15390.1 |
| duf2155 domain-containing protein | HDEN_RS17700 | Not Available | + | 1008125 - 1008640 | 18740.1 |
| porphobilinogen synthase | HDEN_RS04695 | Not Available | - | 1008656 - 1009702 | 37493.8 |
| l,d-transpeptidase family protein | HDEN_RS04700 | Not Available | - | 1009836 - 1011107 | 46339.1 |
| transcriptional regulator ldtr | HDEN_RS04705 | Not Available | - | 1011476 - 1011985 | 19398.3 |
| enoyl-coa hydratase/isomerase family protein | HDEN_RS04710 | Not Available | - | 1012205 - 1013323 | 40677.8 |
| extensin family protein | HDEN_RS04715 | Not Available | + | 1013541 - 1014740 | 41181.5 |
| 5-aminolevulinate synthase | HDEN_RS04720 | Not Available | + | 1015047 - 1016276 | 44330.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
