Escherichia coli O127:H6 str. E2348/69

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli O127:H6 str. E2348/69 is a gram-negative, rod-shaped bacterium, classified as a facultative anaerobe and a chemoheterotroph, thriving optimally between 25°C and 37°C. This specific strain of E. coli is part of the diverse microbiota found in the gastrointestinal tracts of humans and animals, where it plays a crucial role in digestion and nutrient absorption.As a gram-negative organism, E. coli O127:H6 possesses a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides, which contributes to its pathogenicity and ability to evade host immune responses. Its rod shape allows for efficient mobility and colonization of various environments, particularly the intestines. As a facultative anaerobe, E. coli can survive and grow in both aerobic and anaerobic conditions, making it versatile in different environments, from the oxygen-rich intestines to anaerobic areas in the gut. Being a chemoheterotroph, E. coli relies on organic compounds for both carbon and energy, metabolizing simple sugars and amino acids to sustain its growth. This metabolic strategy allows it to flourish in the nutrient-rich environments of the gastrointestinal tract, where it contributes to the breakdown of food and synthesis of vitamins. E. coli O127:H6 str. E2348/69 is notable for its pathogenic potential, particularly in the context of foodborne illnesses. It has been associated with outbreaks of diarrhea and more severe conditions like hemolytic uremic syndrome. This strain's virulence factors, such as adhesins and toxins, facilitate its adherence to and colonization of intestinal epithelial cells, underscoring the importance of understanding its behavior in both health and disease contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainE2348/69

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli O127:H6 str. E2348/69
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementPairs - Singles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli O127:H6 str. E2348/69


Gene Summary

Adenine Count

1487 bp

Thymine Count

1417 bp

Guanine Count

1602 bp

Cytosine Count

1641 bp

Genome Length

6147 bp

Protein-coding Genes

8 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
conjugal transfer protein trbdE2348C_RS25730P41070-62325 - 6264511412.9
conjugal transfer pilus-stabilizing protein trapE2348C_RS25735P41068-62632 - 6322222042.7
f-type conjugal transfer pilus assembly protein trabE2348C_RS25740P41067-63212 - 6463950462.8
type-f conjugative transfer system secretin trakE2348C_RS25745P41066-64639 - 6536725628.6
type iv conjugative transfer system protein traeE2348C_RS25750P08322-65354 - 6592021225.5
type iv conjugative transfer system protein tralE2348C_RS25755P08321-65942 - 6625311904.7
type iv conjugative transfer system pilin traaE2348C_RS25760B1VC86-66268 - 6663312770.2
conjugal transfer relaxosome protein trayE2348C_RS25765P05836-66667 - 668949004.63
pas domain-containing proteinE2348C_RS25770P05837-66989 - 6767526476.7
conjugal transfer relaxosome dna-binding protein tramE2348C_RS25775P18807-67865 - 6824814543.4

Displaying genes 81 – 90 of 5139 in total

Metabolites

1947 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da

Displaying 1–10 of 1947 metabolites