Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| magnesium transporter | SAMN04488505_101928 | Not Available | + | 1168611 - 1169705 | 42310.9 |
| hypothetical protein | SAMN04488505_101929 | Not Available | - | 1169702 - 1170349 | 24595.2 |
| protein of unknown function | SAMN04488505_101930 | Not Available | - | 1170383 - 1170886 | 19237.3 |
| peptidyl-prolyl cis-trans isomerase d | SAMN04488505_101931 | Not Available | - | 1171001 - 1173100 | 77887.4 |
| quinolinate synthetase | SAMN04488505_101932 | Not Available | + | 1173866 - 1174873 | 37463.4 |
| ferrous iron transport protein a | SAMN04488505_101933 | Not Available | - | 1175373 - 1175612 | 8588.7 |
| rrna maturation rnase ybey | SAMN04488505_101934 | Not Available | + | 1175746 - 1176171 | 16499.8 |
| hypothetical protein | SAMN04488505_101935 | Not Available | - | 1178407 - 1178511 | 4082.97 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme | SAMN04488505_101936 | Not Available | + | 1179538 - 1181406 | 69926.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_101937 | Not Available | + | 1181796 - 1182341 | 21114.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.