Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| monofunctional biosynthetic peptidoglycan transglycosylase | SAMN04488505_101908 | Not Available | + | 1139772 - 1140515 | 28514.9 |
| nicotinamide-nucleotide adenylyltransferase, nadr type | SAMN04488505_101909 | Not Available | - | 1140628 - 1141155 | 20475.2 |
| nicotinamide mononucleotide transporter | SAMN04488505_101910 | Not Available | - | 1141148 - 1141783 | 24218.7 |
| fe-s cluster biogenesis protein nfua, 4fe-4s-binding domain | SAMN04488505_101911 | Not Available | - | 1141876 - 1142472 | 21993.8 |
| ferritin | SAMN04488505_101912 | Not Available | + | 1142632 - 1143147 | 19870.8 |
| methylglyoxal synthase | SAMN04488505_101913 | Not Available | + | 1143212 - 1143676 | 17393.1 |
| protein of unknown function | SAMN04488505_101914 | Not Available | - | 1143678 - 1144700 | 38174.5 |
| uncharacterized lipoprotein yddw, upf0748 family | SAMN04488505_101915 | Not Available | + | 1144822 - 1146366 | 59841.8 |
| glutamate synthase (nadh) large subunit | SAMN04488505_101916 | Not Available | + | 1146746 - 1151353 | 170875.0 |
| glutamate synthase (nadh) small subunit | SAMN04488505_101917 | Not Available | + | 1151397 - 1152872 | 53747.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.