Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative hydrolase of the had superfamily | SAMN04488505_101858 | Not Available | - | 1078057 - 1078752 | 26880.3 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN04488505_101859 | Not Available | + | 1078930 - 1079634 | 25209.6 |
| oxygen tolerance | SAMN04488505_101860 | Not Available | + | 1079856 - 1081826 | 74094.4 |
| sh3 domain-containing protein | SAMN04488505_101861 | Not Available | + | 1081823 - 1082584 | 28912.8 |
| two component transcriptional regulator, lyttr family | SAMN04488505_101862 | Not Available | - | 1082579 - 1083325 | 28131.6 |
| histidine kinase | SAMN04488505_101863 | Not Available | - | 1083450 - 1084241 | 30981.2 |
| two-component system, ompr family, alkaline phosphatase synthesis response regulator phop | SAMN04488505_101864 | Not Available | - | 1084415 - 1085125 | 27080.5 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN04488505_101865 | Not Available | - | 1085187 - 1086203 | 39395.2 |
| gliding motility-associated lipoprotein gldh | SAMN04488505_101866 | Not Available | - | 1086200 - 1086709 | 19418.4 |
| tigr00255 family protein | SAMN04488505_101867 | Not Available | - | 1086699 - 1087574 | 33578.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.