Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative oxidoreductase | SAMN04488505_110204 | Not Available | - | 7248801 - 7249277 | 17113.4 |
| hypothetical protein | SAMN04488505_110205 | Not Available | - | 7249366 - 7249821 | 17142.3 |
| gxgyxy sequence motif-containing protein | SAMN04488505_110206 | Not Available | + | 7250233 - 7252218 | 72718.9 |
| arac-like ligand binding domain-containing protein | SAMN04488505_110207 | Not Available | - | 7252245 - 7253135 | 34170.2 |
| l-arabinose isomerase | SAMN04488505_110208 | Not Available | + | 7253324 - 7254757 | 52090.6 |
| abc-type antimicrobial peptide transport system, permease component | SAMN04488505_110209 | Not Available | - | 7254772 - 7257150 | 89169.7 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04488505_110210 | Not Available | - | 7257367 - 7257822 | 17116.9 |
| activator of hsp90 atpase homolog 1-like protein | SAMN04488505_110211 | Not Available | - | 7257865 - 7258353 | 18879.3 |
| transcriptional regulator, arac family with amidase-like domain | SAMN04488505_110212 | Not Available | + | 7258494 - 7259474 | 37144.6 |
| doxx-like family protein | SAMN04488505_110213 | Not Available | - | 7259471 - 7259800 | 12078.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.