Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_102122 | Not Available | + | 1940905 - 1941462 | 21236.5 |
| carbohydrate binding module (family 6) | SAMN04488505_102123 | Not Available | - | 1941557 - 1943041 | 53360.9 |
| glycosyl hydrolases family 43 | SAMN04488505_102124 | Not Available | - | 1943041 - 1944108 | 38345.3 |
| alpha/beta hydrolase family protein | SAMN04488505_102125 | Not Available | + | 1944221 - 1945036 | 29721.7 |
| hypothetical protein | SAMN04488505_102126 | Not Available | + | 1945196 - 1945483 | 11108.5 |
| hypothetical protein | SAMN04488505_102127 | Not Available | + | 1945800 - 1946150 | 13337.2 |
| iron complex outermembrane recepter protein | SAMN04488505_102128 | Not Available | + | 1946997 - 1950041 | 108618.0 |
| starch-binding associating with outer membrane | SAMN04488505_102129 | Not Available | + | 1950060 - 1951610 | 56967.2 |
| pectate lyase | SAMN04488505_102130 | Not Available | + | 1951849 - 1952952 | 38547.3 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488505_102131 | Not Available | + | 1953059 - 1953622 | 21776.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.