Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydrogenase | SAMN04488505_10242 | Not Available | + | 1843627 - 1844700 | 38712.6 |
| acetyltransferase (gnat) domain-containing protein | SAMN04488505_10243 | Not Available | - | 1844762 - 1846033 | 46399.5 |
| protein of unknown function | SAMN04488505_10244 | Not Available | + | 1846131 - 1847357 | 46124.4 |
| hd domain-containing protein | SAMN04488505_10245 | Not Available | + | 1847499 - 1848098 | 23075.2 |
| sos response umud protein. serine peptidase. merops family s24 | SAMN04488505_10246 | Not Available | - | 1848102 - 1848521 | 15366.8 |
| uncharacterized oxidoreductase | SAMN04488505_10247 | Not Available | - | 1848595 - 1849359 | 26869.4 |
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN04488505_10248 | Not Available | - | 1849431 - 1850789 | 51533.1 |
| hypothetical protein | SAMN04488505_10249 | Not Available | - | 1850793 - 1851506 | 25859.0 |
| fixh protein | SAMN04488505_10250 | Not Available | - | 1851509 - 1851955 | 16648.3 |
| cytochrome c oxidase accessory protein fixg | SAMN04488505_10251 | Not Available | - | 1851961 - 1853385 | 53898.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.