Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_1011419 | Not Available | + | 1741243 - 1741890 | 23267.0 |
| hypothetical protein | SAMN04488505_1011420 | Not Available | + | 1741895 - 1742980 | 41142.4 |
| hypothetical protein | SAMN04488505_1011421 | Not Available | + | 1743065 - 1743685 | 23507.2 |
| short-chain dehydrogenase | SAMN04488505_1011422 | Not Available | - | 1743692 - 1744501 | 29280.1 |
| carboxypepd_reg-like domain-containing protein | SAMN04488505_1011423 | Not Available | + | 1744576 - 1745379 | 29178.2 |
| hypothetical protein | SAMN04488505_1011424 | Not Available | + | 1745574 - 1745975 | 15821.6 |
| membrane fusion protein, multidrug efflux system | SAMN04488505_1011425 | Not Available | + | 1746161 - 1747231 | 39884.8 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN04488505_1011426 | Not Available | + | 1747259 - 1750426 | 115827.0 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN04488505_1011427 | Not Available | + | 1750419 - 1751855 | 53302.8 |
| hypothetical protein | SAMN04488505_1011428 | Not Available | - | 1751917 - 1752573 | 23305.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.