Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| intein n-terminal splicing region | SAMN04488505_1011369 | Not Available | + | 1676815 - 1677120 | 11096.5 |
| two-component system, ntrc family, response regulator hydg | SAMN04488505_1011370 | Not Available | + | 1677339 - 1678673 | 49962.1 |
| signal transduction histidine kinase | SAMN04488505_1011371 | Not Available | - | 1678615 - 1681260 | 99216.1 |
| ectoine hydroxylase-related dioxygenase, phytanoyl-coa dioxygenase (phyh) family | SAMN04488505_1011372 | Not Available | - | 1681858 - 1682664 | 30385.2 |
| hypothetical protein | SAMN04488505_1011373 | Not Available | - | 1683070 - 1683858 | 28737.1 |
| rna polymerase sigma factor, sigma-70 family | SAMN04488505_1011374 | Not Available | + | 1683932 - 1684552 | 23708.2 |
| fecr family protein | SAMN04488505_1011375 | Not Available | + | 1684598 - 1685641 | 39542.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_1011376 | Not Available | + | 1685668 - 1689162 | 127092.0 |
| starch-binding associating with outer membrane | SAMN04488505_1011377 | Not Available | + | 1689188 - 1690744 | 56936.4 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN04488505_1011378 | Not Available | + | 1690773 - 1691240 | 16657.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.