Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function, duf488 | SAMN04488505_1011359 | Not Available | - | 1665372 - 1665890 | 19662.7 |
| helix-turn-helix domain-containing protein | SAMN04488505_1011360 | Not Available | + | 1665971 - 1666876 | 34649.2 |
| predicted oxidoreductase | SAMN04488505_1011361 | Not Available | + | 1666957 - 1667958 | 36167.4 |
| endonuclease g | SAMN04488505_1011362 | Not Available | - | 1668109 - 1669449 | 46621.6 |
| putative membrane protein | SAMN04488505_1011363 | Not Available | - | 1669679 - 1670590 | 35276.3 |
| hypothetical protein | SAMN04488505_1011364 | Not Available | - | 1670622 - 1671104 | 18684.9 |
| abc-type antimicrobial peptide transport system, permease component | SAMN04488505_1011365 | Not Available | + | 1671348 - 1673729 | 88980.1 |
| signal transduction histidine kinase | SAMN04488505_1011366 | Not Available | - | 1673733 - 1675097 | 50960.8 |
| two component transcriptional regulator, winged helix family | SAMN04488505_1011367 | Not Available | - | 1675081 - 1675773 | 26011.6 |
| polyisoprenoid-binding protein ycei | SAMN04488505_1011368 | Not Available | + | 1676070 - 1676618 | 20501.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.