Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488505_1011308 | Not Available | + | 1608787 - 1609674 | 34115.2 |
| hypothetical protein | SAMN04488505_1011309 | Not Available | + | 1609680 - 1610864 | 46018.3 |
| glycosyl transferase family 2 | SAMN04488505_1011310 | Not Available | + | 1610845 - 1611690 | 32808.5 |
| beta-galactosidase | SAMN04488505_1011311 | Not Available | + | 1611748 - 1613067 | 50003.9 |
| hypothetical protein | SAMN04488505_1011312 | Not Available | - | 1613078 - 1613899 | 31640.3 |
| cytochrome c peroxidase | SAMN04488505_1011313 | Not Available | + | 1614164 - 1615927 | 65721.3 |
| hypothetical protein | SAMN04488505_1011314 | Not Available | + | 1616019 - 1617347 | 49736.5 |
| hypothetical protein | SAMN04488505_1011315 | Not Available | + | 1617541 - 1619115 | 60642.7 |
| atp-binding cassette, subfamily f, uup | SAMN04488505_1011316 | Not Available | + | 1619778 - 1621676 | 72397.1 |
| glycosyl hydrolases family 2, tim barrel domain | SAMN04488505_1011317 | Not Available | + | 1621900 - 1623222 | 50233.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.