Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_1011298 | Not Available | + | 1598978 - 1599427 | 17410.7 |
| glutamate-1-semialdehyde 2,1-aminomutase | SAMN04488505_1011299 | Not Available | + | 1599411 - 1600709 | 48057.7 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488505_1011300 | Not Available | + | 1600712 - 1601449 | 27323.8 |
| transferase hexapeptide (six repeat-containing protein) | SAMN04488505_1011301 | Not Available | + | 1601460 - 1602041 | 21068.9 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN04488505_1011302 | Not Available | + | 1602038 - 1603582 | 58845.9 |
| hypothetical protein | SAMN04488505_1011303 | Not Available | + | 1603587 - 1605371 | 69840.9 |
| acetyltransferase (isoleucine patch superfamily) | SAMN04488505_1011304 | Not Available | + | 1605375 - 1606061 | 25713.1 |
| hexapeptide repeat of succinyl-transferase | SAMN04488505_1011305 | Not Available | + | 1606067 - 1606630 | 21044.0 |
| dtdp-l-rhamnose 4-epimerase | SAMN04488505_1011306 | Not Available | + | 1606638 - 1607777 | 41864.0 |
| glycosyl transferase family 2 | SAMN04488505_1011307 | Not Available | + | 1607793 - 1608755 | 37028.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.