Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| superoxide dismutase, fe-mn family | SAMN04488505_1011268 | Not Available | - | 1555237 - 1555848 | 22421.2 |
| rna polymerase sigma factor, sigma-70 family | SAMN04488505_1011269 | Not Available | + | 1556286 - 1556993 | 27300.8 |
| regulator of protease activity hflc, stomatin/prohibitin superfamily | SAMN04488505_1011270 | Not Available | + | 1557201 - 1558136 | 35040.8 |
| tonb-dependent receptor plug domain | SAMN04488505_1011271 | Not Available | - | 1558256 - 1561591 | 121917.0 |
| trna(adenine34) deaminase | SAMN04488505_1011272 | Not Available | - | 1562509 - 1562952 | 16710.1 |
| methyltransferase domain-containing protein | SAMN04488505_1011273 | Not Available | - | 1562969 - 1563763 | 29384.8 |
| dna ligase (nad+) | SAMN04488505_1011274 | Not Available | - | 1563769 - 1565877 | 78597.1 |
| hypothetical protein | SAMN04488505_1011275 | Not Available | + | 1565926 - 1567575 | 60269.4 |
| 8-oxo-dgtp diphosphatase | SAMN04488505_1011276 | Not Available | + | 1567716 - 1568426 | 27814.5 |
| methylmalonyl-coa mutase | SAMN04488505_1011277 | Not Available | - | 1569141 - 1572530 | 126628.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.