Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| membrane protein required for colicin v production | SAMN04488505_1011248 | Not Available | + | 1530493 - 1531035 | 20132.6 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04488505_1011249 | Not Available | + | 1531107 - 1531871 | 28579.9 |
| cbs domain-containing protein | SAMN04488505_1011250 | Not Available | + | 1532079 - 1532741 | 25238.3 |
| surface antigen variable number repeat-containing protein | SAMN04488505_1011251 | Not Available | + | 1533154 - 1534578 | 55086.2 |
| nad+ kinase | SAMN04488505_1011252 | Not Available | + | 1534649 - 1535539 | 32896.7 |
| hypothetical protein | SAMN04488505_1011253 | Not Available | + | 1535779 - 1536645 | 32837.9 |
| undecaprenyl pyrophosphate synthetase | SAMN04488505_1011254 | Not Available | + | 1536909 - 1537670 | 29100.8 |
| beta-barrel assembly machine subunit bama | SAMN04488505_1011255 | Not Available | + | 1537651 - 1540386 | 103333.0 |
| periplasmic chaperone for outer membrane proteins skp | SAMN04488505_1011256 | Not Available | + | 1540487 - 1541005 | 19833.1 |
| periplasmic chaperone for outer membrane proteins skp | SAMN04488505_1011257 | Not Available | + | 1541057 - 1541566 | 18530.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.