Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arac-type dna-binding protein | SAMN04488505_1011238 | Not Available | + | 1519327 - 1520235 | 35011.7 |
| protein of unknown function | SAMN04488505_1011239 | Not Available | - | 1520363 - 1520701 | 11814.1 |
| hypothetical protein | SAMN04488505_1011240 | Not Available | - | 1520705 - 1521469 | 28328.5 |
| uncharacterized conserved protein, implicated in type vi secretion and phage assembly | SAMN04488505_1011241 | Not Available | - | 1521447 - 1524557 | 115305.0 |
| protein of unknown function | SAMN04488505_1011242 | Not Available | - | 1524701 - 1525906 | 45989.0 |
| peptide/nickel transport system permease protein | SAMN04488505_1011243 | Not Available | + | 1526063 - 1527136 | 39111.8 |
| hypothetical protein | SAMN04488505_1011244 | Not Available | + | 1527439 - 1527894 | 16030.3 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488505_1011245 | Not Available | + | 1528138 - 1529253 | 41195.4 |
| protein involved in gliding motility gldc | SAMN04488505_1011246 | Not Available | + | 1529377 - 1529727 | 13557.2 |
| hypothetical protein | SAMN04488505_1011247 | Not Available | + | 1529954 - 1530406 | 16217.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.