Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dolichyl-phosphate-mannose-protein mannosyltransferase | SAMN04488505_1011218 | Not Available | + | 1494043 - 1495737 | 65434.9 |
| thiamine-phosphate kinase | SAMN04488505_1011219 | Not Available | - | 1495792 - 1496826 | 37912.0 |
| four helix bundle protein | SAMN04488505_1011220 | Not Available | - | 1496847 - 1497224 | 14226.2 |
| myo-inositol-1(or 4)-monophosphatase | SAMN04488505_1011221 | Not Available | - | 1497284 - 1498054 | 28104.4 |
| gh3 auxin-responsive promoter | SAMN04488505_1011222 | Not Available | + | 1498140 - 1499684 | 59131.5 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN04488505_1011223 | Not Available | + | 1499779 - 1500420 | 23114.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_1011224 | Not Available | + | 1500665 - 1501180 | 19959.2 |
| fecr family protein | SAMN04488505_1011225 | Not Available | + | 1501252 - 1502289 | 38284.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_1011226 | Not Available | + | 1502355 - 1505639 | 121278.0 |
| starch-binding associating with outer membrane | SAMN04488505_1011227 | Not Available | + | 1505675 - 1507453 | 66742.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.