Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hemolysin, contains cbs domains | SAMN04488505_1011208 | Not Available | + | 1482388 - 1483656 | 48174.0 |
| sec-independent protein translocase tatc | SAMN04488505_1011209 | Not Available | + | 1484293 - 1485153 | 33194.2 |
| ribose 5-phosphate isomerase b | SAMN04488505_1011210 | Not Available | + | 1485231 - 1485692 | 16718.9 |
| zn-dependent amino-or carboxypeptidase, m28 family | SAMN04488505_1011211 | Not Available | + | 1485825 - 1487408 | 59003.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_1011212 | Not Available | + | 1487927 - 1488427 | 19614.9 |
| dna helicase-2 / atp-dependent dna helicase pcra | SAMN04488505_1011213 | Not Available | + | 1488506 - 1490857 | 88798.9 |
| regulatory protein | SAMN04488505_1011214 | Not Available | + | 1491086 - 1491547 | 17811.2 |
| carbon-nitrogen hydrolase | SAMN04488505_1011215 | Not Available | + | 1491621 - 1492415 | 30358.4 |
| glyoxylase i family protein | SAMN04488505_1011216 | Not Available | + | 1492469 - 1492858 | 14771.7 |
| n-acetylglucosamine-6-phosphate deacetylase | SAMN04488505_1011217 | Not Available | + | 1492869 - 1493972 | 39785.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.