Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna end-binding protein ku | SAMN04488505_1011188 | Not Available | + | 1460592 - 1461383 | 30460.7 |
| atp-dependent dna ligase ligd phosphoesterase module /atp-dependent dna ligase ligd polymerase module | SAMN04488505_1011189 | Not Available | + | 1461380 - 1464061 | 100457.0 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN04488505_1011190 | Not Available | + | 1464163 - 1465500 | 49382.9 |
| chromate transporter | SAMN04488505_1011191 | Not Available | - | 1465497 - 1466708 | 45241.1 |
| isopenicillin n synthase | SAMN04488505_1011192 | Not Available | - | 1466744 - 1467703 | 35936.6 |
| outer membrane transport energization protein exbd | SAMN04488505_1011193 | Not Available | - | 1467850 - 1468377 | 19633.9 |
| asparaginyl-trna synthetase | SAMN04488505_1011194 | Not Available | - | 1468630 - 1470066 | 54717.4 |
| transcription termination factor rho | SAMN04488505_1011195 | Not Available | + | 1470547 - 1472289 | 64984.3 |
| hypothetical protein | SAMN04488505_1011196 | Not Available | - | 1472347 - 1472520 | 6014.45 |
| two component transcriptional regulator, lyttr family | SAMN04488505_1011197 | Not Available | - | 1472645 - 1473391 | 28437.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.