Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| response regulator receiver domain-containing protein | SAMN04488505_1011178 | Not Available | + | 1451646 - 1452044 | 14606.8 |
| two-component system, ntrc family, response regulator hydg | SAMN04488505_1011179 | Not Available | + | 1452116 - 1453555 | 54176.2 |
| low affinity fe/cu permease | SAMN04488505_1011180 | Not Available | + | 1453567 - 1454052 | 18080.8 |
| pas/pac sensor hybrid histidine kinase | SAMN04488505_1011181 | Not Available | - | 1454122 - 1455555 | 53928.6 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN04488505_1011182 | Not Available | - | 1455683 - 1457101 | 53963.3 |
| hypothetical protein | SAMN04488505_1011183 | Not Available | + | 1457380 - 1457571 | 6951.95 |
| ferritin-like metal-binding protein ycie | SAMN04488505_1011184 | Not Available | + | 1457616 - 1458182 | 20442.0 |
| amidohydrolase, pncc family | SAMN04488505_1011185 | Not Available | + | 1458396 - 1458905 | 18292.0 |
| dna topoisomerase-1 | SAMN04488505_1011186 | Not Available | + | 1458997 - 1460040 | 40056.4 |
| hypothetical protein | SAMN04488505_1011187 | Not Available | - | 1460111 - 1460452 | 13151.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.