Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | SAMN04488505_1011108 | Not Available | - | 1366323 - 1368275 | 71931.6 |
| transcriptional regulator, arac family | SAMN04488505_1011109 | Not Available | + | 1368364 - 1369224 | 33482.0 |
| multidrug efflux pump subunit acrb | SAMN04488505_1011110 | Not Available | + | 1369369 - 1372593 | 117540.0 |
| rnd family efflux transporter, mfp subunit | SAMN04488505_1011111 | Not Available | + | 1372619 - 1373722 | 40344.5 |
| peptide deformylase | SAMN04488505_1011112 | Not Available | - | 1373848 - 1374288 | 16616.9 |
| arac-type dna-binding protein | SAMN04488505_1011113 | Not Available | + | 1374452 - 1375258 | 29834.1 |
| hypothetical protein | SAMN04488505_1011114 | Not Available | + | 1375258 - 1375611 | 13534.2 |
| tetratricopeptide repeat-containing protein | SAMN04488505_1011115 | Not Available | - | 1375675 - 1376412 | 28551.2 |
| ca-activated chloride channel family protein | SAMN04488505_1011116 | Not Available | - | 1376415 - 1377443 | 38310.7 |
| beta-lactamase class d | SAMN04488505_1011117 | Not Available | - | 1377690 - 1378490 | 31065.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.