Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein ycii, contains a putative active-site phosphohistidine | SAMN04488505_1011008 | Not Available | - | 1257836 - 1258123 | 11197.6 |
| hypothetical protein | SAMN04488505_1011009 | Not Available | + | 1258293 - 1260059 | 64128.5 |
| anti-sigma-k factor rska | SAMN04488505_1011010 | Not Available | - | 1260248 - 1261054 | 29305.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_1011011 | Not Available | - | 1261056 - 1261601 | 20869.3 |
| putative abc transport system atp-binding protein | SAMN04488505_1011012 | Not Available | + | 1261706 - 1262356 | 24844.9 |
| ftsx-like permease family protein | SAMN04488505_1011013 | Not Available | + | 1262416 - 1263603 | 43990.2 |
| imidazolonepropionase | SAMN04488505_1011014 | Not Available | + | 1263800 - 1265113 | 46459.1 |
| stress responsive a/b barrel domain | SAMN04488505_1011015 | Not Available | + | 1265115 - 1265444 | 12565.9 |
| protein of unknown function | SAMN04488505_1011016 | Not Available | - | 1265611 - 1268178 | 98347.3 |
| protein of unknown function | SAMN04488505_1011017 | Not Available | - | 1268207 - 1269313 | 41700.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.