Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair protein mutl | SAMN04488505_101998 | Not Available | - | 1241014 - 1242894 | 70255.1 |
| peptide-methionine (r)-s-oxide reductase | SAMN04488505_101999 | Not Available | + | 1243025 - 1243579 | 20845.6 |
| transcriptional regulator, lyttr family | SAMN04488505_1011000 | Not Available | + | 1243896 - 1244771 | 32787.2 |
| hypothetical protein | SAMN04488505_1011001 | Not Available | + | 1244913 - 1245608 | 25397.2 |
| polyketide cyclase / dehydrase and lipid transport | SAMN04488505_1011002 | Not Available | + | 1245655 - 1246194 | 19755.8 |
| outer membrane protein tolc | SAMN04488505_1011003 | Not Available | - | 1246259 - 1247557 | 47276.1 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN04488505_1011004 | Not Available | - | 1247569 - 1250640 | 112395.0 |
| membrane fusion protein, multidrug efflux system | SAMN04488505_1011005 | Not Available | - | 1250677 - 1251741 | 37637.5 |
| starch-binding associating with outer membrane | SAMN04488505_1011006 | Not Available | - | 1252416 - 1254140 | 63927.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_1011007 | Not Available | - | 1254151 - 1257393 | 119338.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.