Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase) | SAMN04488505_101978 | Not Available | + | 1220469 - 1221194 | 27083.8 |
| alcohol dehydrogenase, class iv | SAMN04488505_101979 | Not Available | + | 1221263 - 1222339 | 39969.1 |
| predicted arabinose efflux permease, mfs family | SAMN04488505_101980 | Not Available | - | 1222521 - 1223750 | 44723.1 |
| starvation-inducible dna-binding protein | SAMN04488505_101981 | Not Available | + | 1223865 - 1224380 | 19965.9 |
| uncharacterized conserved protein, laba/duf88 family | SAMN04488505_101982 | Not Available | + | 1224449 - 1225222 | 28808.7 |
| o-acetyl-adp-ribose deacetylase (regulator of rnase iii), contains macro domain | SAMN04488505_101983 | Not Available | + | 1225224 - 1225748 | 18357.1 |
| hypothetical protein | SAMN04488505_101984 | Not Available | - | 1225809 - 1225949 | 5383.91 |
| 2-oxoisovalerate dehydrogenase e1 component | SAMN04488505_101985 | Not Available | - | 1226017 - 1227993 | 72606.2 |
| hypothetical protein | SAMN04488505_101986 | Not Available | + | 1228266 - 1228433 | 5951.32 |
| putative membrane protein | SAMN04488505_101987 | Not Available | - | 1228440 - 1228793 | 12674.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.