Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arabinose-5-phosphate isomerase | SAMN04488505_101948 | Not Available | + | 1193363 - 1194337 | 35348.2 |
| mannose-1-phosphate guanylyltransferase | SAMN04488505_101949 | Not Available | + | 1194356 - 1195438 | 40758.8 |
| 2-keto-4-methylthiobutyrate aminotransferase apoenzyme | SAMN04488505_101950 | Not Available | + | 1195555 - 1196691 | 42917.8 |
| carbonic anhydrase | SAMN04488505_101951 | Not Available | - | 1196920 - 1197600 | 24664.7 |
| sulfate permease, mfs superfamily | SAMN04488505_101952 | Not Available | - | 1197661 - 1199316 | 58684.5 |
| hypothetical protein | SAMN04488505_101953 | Not Available | - | 1199511 - 1199798 | 10875.4 |
| transcriptional regulator, padr family | SAMN04488505_101954 | Not Available | + | 1200095 - 1200433 | 12933.6 |
| phage shock protein c (pspc) family protein | SAMN04488505_101955 | Not Available | + | 1200494 - 1202311 | 68641.4 |
| ferrous iron transport protein b | SAMN04488505_101956 | Not Available | + | 1202516 - 1204651 | 78730.7 |
| peptidase family m28 | SAMN04488505_101957 | Not Available | + | 1204664 - 1205722 | 39475.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.