Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane-anchored protein yitt, contains duf161 and duf2179 domains | SAMN04488505_101898 | Not Available | - | 1128496 - 1129392 | 32464.9 |
| arginase family enzyme | SAMN04488505_101899 | Not Available | - | 1129830 - 1130969 | 43066.1 |
| hypothetical protein | SAMN04488505_101900 | Not Available | - | 1131267 - 1131515 | 9732.96 |
| udp:flavonoid glycosyltransferase yjic, ydhe family | SAMN04488505_101901 | Not Available | + | 1131872 - 1132963 | 41235.4 |
| arsenate reductase | SAMN04488505_101902 | Not Available | - | 1133170 - 1133499 | 12425.2 |
| dna polymerase i | SAMN04488505_101903 | Not Available | + | 1133605 - 1136430 | 105661.0 |
| protein n-acetyltransferase, rimj/riml family | SAMN04488505_101904 | Not Available | + | 1136736 - 1137290 | 21249.3 |
| bleomycin hydrolase | SAMN04488505_101905 | Not Available | + | 1137479 - 1138621 | 43094.9 |
| hypothetical protein | SAMN04488505_101906 | Not Available | - | 1138754 - 1139017 | 9633.92 |
| trna threonylcarbamoyl adenosine modification protein, sua5/ycio/yrdc/ywlc family | SAMN04488505_101907 | Not Available | - | 1139047 - 1139664 | 22788.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.