Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| outer membrane receptor proteins, mostly fe transport | SAMN04488505_101878 | Not Available | + | 1098549 - 1101362 | 104714.0 |
| hypothetical protein | SAMN04488505_101879 | Not Available | - | 1101506 - 1101808 | 11248.0 |
| hydroxypyruvate isomerase | SAMN04488505_101880 | Not Available | + | 1102353 - 1103246 | 33840.6 |
| amino acid/polyamine/organocation transporter, apc superfamily | SAMN04488505_101881 | Not Available | + | 1103618 - 1105078 | 52837.0 |
| ribosomal-protein-serine acetyltransferase | SAMN04488505_101882 | Not Available | - | 1105241 - 1105933 | 26911.8 |
| hypothetical protein | SAMN04488505_101883 | Not Available | - | 1105936 - 1106571 | 23976.7 |
| de-hypoxanthine futalosine cyclase | SAMN04488505_101884 | Not Available | - | 1107249 - 1108373 | 42485.3 |
| aspartyl protease | SAMN04488505_101885 | Not Available | + | 1109187 - 1110461 | 47353.8 |
| aspartyl protease | SAMN04488505_101886 | Not Available | + | 1110531 - 1111412 | 32565.4 |
| predicted zn-dependent peptidase | SAMN04488505_101887 | Not Available | + | 1111514 - 1112758 | 47375.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.