Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna pseudouridine2457 synthase | SAMN04488505_101868 | Not Available | - | 1087722 - 1088306 | 22345.2 |
| crp/fnr family transcriptional regulator, anaerobic regulatory protein | SAMN04488505_101869 | Not Available | + | 1088323 - 1089075 | 27854.9 |
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | SAMN04488505_101870 | Not Available | + | 1089675 - 1090619 | 33965.1 |
| hypothetical protein | SAMN04488505_101871 | Not Available | + | 1090691 - 1091380 | 25601.6 |
| nucleoside-diphosphate-sugar epimerase | SAMN04488505_101872 | Not Available | - | 1091369 - 1092364 | 36719.3 |
| 3-hydroxybutyryl-coa dehydrogenase | SAMN04488505_101873 | Not Available | - | 1092698 - 1093561 | 30837.2 |
| phenylalanyl-trna synthetase, alpha subunit | SAMN04488505_101874 | Not Available | - | 1093634 - 1094662 | 39210.9 |
| gaf domain-containing protein | SAMN04488505_101875 | Not Available | + | 1094732 - 1096030 | 49271.1 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04488505_101876 | Not Available | - | 1096027 - 1096719 | 26442.3 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN04488505_101877 | Not Available | - | 1096802 - 1098367 | 59908.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.