Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_101838 | Not Available | - | 1056218 - 1057501 | 47742.7 |
| Trna-met | Not Available | Not Available | + | 1057679 - 1057752 | Not Available |
| repeat domain-containing protein | SAMN04488505_101840 | Not Available | - | 1057852 - 1059843 | 74520.4 |
| putative hydrolase of the had superfamily | SAMN04488505_101841 | Not Available | + | 1059909 - 1060538 | 23930.7 |
| protein of unknown function | SAMN04488505_101842 | Not Available | - | 1060650 - 1060901 | 10081.1 |
| tm2 domain-containing protein | SAMN04488505_101843 | Not Available | - | 1060971 - 1061324 | 13336.4 |
| ribosome maturation factor rimp | SAMN04488505_101844 | Not Available | + | 1061770 - 1062312 | 20008.5 |
| nusa antitermination factor | SAMN04488505_101845 | Not Available | + | 1062331 - 1063578 | 47523.6 |
| translation initiation factor if-2 | SAMN04488505_101846 | Not Available | + | 1063743 - 1067177 | 123281.0 |
| periplasmic chaperone for outer membrane proteins sura | SAMN04488505_101847 | Not Available | + | 1067345 - 1068727 | 52521.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.