Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tldd protein | SAMN04488505_101818 | Not Available | - | 1029984 - 1031588 | 58476.5 |
| hypothetical protein | SAMN04488505_101819 | Not Available | - | 1031801 - 1033309 | 55354.4 |
| hypothetical protein | SAMN04488505_101820 | Not Available | - | 1033309 - 1035453 | 80470.0 |
| n-terminal double-transmembrane domain-containing protein | SAMN04488505_101821 | Not Available | - | 1035446 - 1036801 | 50597.9 |
| protein of unknown function duf58 | SAMN04488505_101822 | Not Available | - | 1036841 - 1037731 | 34007.9 |
| moxr-like atpase | SAMN04488505_101823 | Not Available | - | 1037943 - 1038950 | 37397.5 |
| protein of unknown function | SAMN04488505_101824 | Not Available | + | 1039390 - 1039983 | 22710.6 |
| glycosyl hydrolases family 2 | SAMN04488505_101825 | Not Available | - | 1040130 - 1042775 | 99038.3 |
| starch-binding associating with outer membrane | SAMN04488505_101826 | Not Available | - | 1042879 - 1044414 | 57405.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_101827 | Not Available | - | 1044440 - 1047790 | 121622.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.