Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thiamine-phosphate diphosphorylase | SAMN04488505_101808 | Not Available | + | 1019573 - 1020223 | 22562.4 |
| thiazole-phosphate synthase | SAMN04488505_101809 | Not Available | + | 1020234 - 1021010 | 27687.7 |
| tyrosine lyase thih | SAMN04488505_101810 | Not Available | + | 1021302 - 1022420 | 42600.0 |
| conserved hypothetical protein | SAMN04488505_101811 | Not Available | - | 1022773 - 1023231 | 17217.1 |
| fecr family protein | SAMN04488505_101812 | Not Available | - | 1023853 - 1024911 | 39872.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_101813 | Not Available | - | 1025092 - 1025694 | 23207.2 |
| uncharacterized zinc-type alcohol dehydrogenase-like protein | SAMN04488505_101814 | Not Available | - | 1025804 - 1026859 | 37968.7 |
| predicted atpase | SAMN04488505_101815 | Not Available | + | 1027225 - 1027785 | 20627.7 |
| transcriptional regulator, arsr family | SAMN04488505_101816 | Not Available | + | 1027824 - 1028507 | 25351.6 |
| predicted zn-dependent protease or its inactivated homolog | SAMN04488505_101817 | Not Available | - | 1028639 - 1029973 | 48621.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.