Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN04488505_101797 | Not Available | - | 1009036 - 1009665 | 23993.1 |
| aspartate aminotransferase | SAMN04488505_101798 | Not Available | - | 1010241 - 1011500 | 46595.2 |
| dna polymerase iii, beta subunit | SAMN04488505_101799 | Not Available | + | 1011836 - 1012954 | 41380.7 |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN04488505_101800 | Not Available | + | 1013325 - 1014152 | 31896.1 |
| hypothetical protein | SAMN04488505_101801 | Not Available | + | 1014199 - 1014450 | 8380.57 |
| lipocalin-like | SAMN04488505_101802 | Not Available | - | 1014725 - 1015243 | 18965.0 |
| sulfur carrier protein this | SAMN04488505_101804 | Not Available | + | 1015741 - 1015944 | 7425.2 |
| hydroxymethylpyrimidine synthase | SAMN04488505_101805 | Not Available | + | 1016355 - 1018205 | 68296.3 |
| thiamine-phosphate pyrophosphorylase | SAMN04488505_101806 | Not Available | + | 1018219 - 1018848 | 23282.1 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | SAMN04488505_101807 | Not Available | + | 1018845 - 1019576 | 26353.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.