Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-acp methyl ester carboxylesterase | SAMN04488505_101767 | Not Available | + | 970310 - 971038 | 28656.8 |
| predicted component of virus defense system, contains pd-(d/e)xk nuclease domain, duf524 | SAMN04488505_101768 | Not Available | - | 971543 - 973969 | 95179.7 |
| 5-methylcytosine-specific restriction endonuclease mcrbc, gtp-binding regulatory subunit mcrb | SAMN04488505_101769 | Not Available | - | 973966 - 975657 | 65664.4 |
| ntp pyrophosphatase, house-cleaning of non-canonical ntps | SAMN04488505_101770 | Not Available | - | 975654 - 975983 | 12749.3 |
| Trna-asn | Not Available | Not Available | + | 976471 - 976544 | Not Available |
| 4-amino-4-deoxy-l-arabinose transferase | SAMN04488505_101772 | Not Available | - | 976688 - 978406 | 65083.1 |
| 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit | SAMN04488505_101773 | Not Available | - | 978508 - 978855 | 13076.5 |
| gtp-binding protein hflx | SAMN04488505_101774 | Not Available | - | 978925 - 980115 | 46112.8 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN04488505_101775 | Not Available | + | 980329 - 982356 | 75870.7 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase | SAMN04488505_101776 | Not Available | + | 982675 - 983454 | 28008.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.