Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488505_101747 | Not Available | + | 945592 - 946629 | 39647.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_101748 | Not Available | + | 946641 - 949874 | 120275.0 |
| starch-binding associating with outer membrane | SAMN04488505_101749 | Not Available | + | 949886 - 951385 | 56731.7 |
| fasciclin domain-containing protein | SAMN04488505_101750 | Not Available | + | 951396 - 952091 | 26562.9 |
| delta-60 repeat domain-containing protein | SAMN04488505_101751 | Not Available | + | 952104 - 953705 | 57395.5 |
| predicted arabinose efflux permease, mfs family | SAMN04488505_101752 | Not Available | - | 953650 - 954843 | 42795.6 |
| 3-dehydro-l-gulonate 2-dehydrogenase | SAMN04488505_101753 | Not Available | + | 954911 - 955897 | 35689.2 |
| pyrimidine reductase, riboflavin biosynthesis | SAMN04488505_101754 | Not Available | + | 956059 - 956742 | 24862.7 |
| pp_00743 | SAMN04488505_101755 | Not Available | - | 956817 - 958244 | Not Available |
| hypothetical protein | SAMN04488505_101756 | Not Available | - | 958285 - 960516 | 83922.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.