Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-his | Not Available | Not Available | + | 924062 - 924133 | Not Available |
| Trna-gln | Not Available | Not Available | + | 924146 - 924217 | Not Available |
| Trna-ile | Not Available | Not Available | + | 924220 - 924294 | Not Available |
| Trna-ile | Not Available | Not Available | + | 924303 - 924376 | Not Available |
| Trna-asp | Not Available | Not Available | + | 924401 - 924472 | Not Available |
| phytanoyl-coa dioxygenase (phyh) | SAMN04488505_101732 | Not Available | - | 924962 - 925678 | 27271.8 |
| l,d-transpeptidase catalytic domain | SAMN04488505_101733 | Not Available | + | 926044 - 926697 | 23745.6 |
| putative peptidoglycan binding domain-containing protein | SAMN04488505_101734 | Not Available | - | 926776 - 928404 | 61372.6 |
| hypothetical protein | SAMN04488505_101735 | Not Available | - | 928401 - 928865 | 17809.1 |
| predicted acyltransferase | SAMN04488505_101736 | Not Available | - | 929083 - 930273 | 44470.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.