Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| quinol:cytochrome c oxidoreductase pentaheme cytochrome subunit | SAMN04488505_101687 | Not Available | - | 866551 - 867825 | 46967.2 |
| nlpe n-terminal domain-containing protein | SAMN04488505_101688 | Not Available | + | 868107 - 868883 | 28728.1 |
| formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase | SAMN04488505_101689 | Not Available | + | 869165 - 869746 | 21405.8 |
| hypothetical protein | SAMN04488505_101690 | Not Available | + | 869765 - 870463 | 26632.3 |
| thioredoxin-related protein | SAMN04488505_101691 | Not Available | - | 870514 - 871023 | 18936.1 |
| outer membrane receptor for ferrienterochelin and colicins | SAMN04488505_101692 | Not Available | - | 871042 - 873345 | 85335.0 |
| gtpase, g3e family | SAMN04488505_101693 | Not Available | - | 873553 - 874737 | 44987.5 |
| merc mercury resistance protein | SAMN04488505_101694 | Not Available | - | 874759 - 875136 | 13912.0 |
| protein sco1/2 | SAMN04488505_101695 | Not Available | + | 875374 - 876000 | 23471.2 |
| fur family transcriptional regulator, ferric uptake regulator | SAMN04488505_101696 | Not Available | + | 876027 - 876455 | 15940.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.