Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb family c-terminal domain-containing protein | SAMN04488505_112128 | Not Available | + | 7810035 - 7810469 | 16054.6 |
| ompa family protein | SAMN04488505_112129 | Not Available | - | 7810570 - 7811835 | 45941.8 |
| serine protease, subtilisin family | SAMN04488505_112130 | Not Available | - | 7812226 - 7813758 | 53586.6 |
| cupin domain protein | SAMN04488505_112131 | Not Available | + | 7813964 - 7814470 | 17980.5 |
| pectate lyase superfamily protein | SAMN04488505_112132 | Not Available | + | 7814520 - 7817480 | 110420.0 |
| Trna-gln | Not Available | Not Available | + | 7817568 - 7817638 | Not Available |
| adp-heptose:lps heptosyltransferase | SAMN04488505_112134 | Not Available | - | 7817730 - 7818761 | 38135.0 |
| protein of unknown function | SAMN04488505_112135 | Not Available | - | 7818767 - 7819372 | 23695.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_112136 | Not Available | + | 7819681 - 7820214 | 21223.7 |
| c-terminal processing protease ctpa/prc, contains a pdz domain | SAMN04488505_112137 | Not Available | + | 7820225 - 7821628 | 50346.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.