Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04488505_111175 | Not Available | - | 7485784 - 7486485 | 27226.0 |
| protein of unknown function | SAMN04488505_111176 | Not Available | - | 7486742 - 7487539 | 30576.9 |
| lysylphosphatidylglycerol synthase tm region | SAMN04488505_111177 | Not Available | - | 7487549 - 7488415 | 32272.1 |
| holliday junction endonuclease ruvc | SAMN04488505_111178 | Not Available | + | 7488570 - 7489133 | 20703.4 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04488505_111179 | Not Available | + | 7489382 - 7490152 | 29453.6 |
| histidine triad (hit) family protein | SAMN04488505_111180 | Not Available | - | 7490127 - 7490531 | 15187.6 |
| transcription elongation factor grea | SAMN04488505_111181 | Not Available | - | 7490662 - 7491135 | 16854.1 |
| d-3-phosphoglycerate dehydrogenase | SAMN04488505_111182 | Not Available | - | 7491248 - 7492174 | 34361.3 |
| dimethyladenosine transferase | SAMN04488505_111183 | Not Available | - | 7492171 - 7492923 | 28982.4 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | SAMN04488505_111184 | Not Available | + | 7492999 - 7494060 | 39006.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.