Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | + | 7442874 - 7442955 | Not Available |
| trigger factor | SAMN04488505_111136 | Not Available | + | 7443197 - 7444582 | 53310.0 |
| atp-dependent clp protease, protease subunit | SAMN04488505_111137 | Not Available | + | 7444569 - 7445270 | 26210.5 |
| atp-dependent clp protease atp-binding subunit clpx | SAMN04488505_111138 | Not Available | + | 7445406 - 7446638 | 45792.5 |
| hypothetical protein | SAMN04488505_111139 | Not Available | + | 7446721 - 7446927 | 7443.74 |
| hypothetical protein | SAMN04488505_111140 | Not Available | - | 7446993 - 7447226 | 8529.81 |
| acyl-coa reductase | SAMN04488505_111141 | Not Available | - | 7447602 - 7449230 | 60253.9 |
| acyl-coa dehydrogenase | SAMN04488505_111142 | Not Available | - | 7449557 - 7450699 | 41509.8 |
| competence protein comea helix-hairpin-helix repeat region | SAMN04488505_111143 | Not Available | - | 7450779 - 7451525 | 28653.5 |
| phosphoribosyl 1,2-cyclic phosphate phosphodiesterase | SAMN04488505_111144 | Not Available | - | 7451805 - 7452563 | 28473.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.