Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | + | 7430995 - 7431070 | Not Available |
| right handed beta helix region | SAMN04488505_111126 | Not Available | + | 7431358 - 7432791 | 51860.7 |
| right handed beta helix region | SAMN04488505_111127 | Not Available | + | 7433173 - 7434582 | 50818.4 |
| siderophore-interacting protein | SAMN04488505_111128 | Not Available | - | 7434893 - 7435606 | 25727.8 |
| arac-type dna-binding protein | SAMN04488505_111129 | Not Available | - | 7435692 - 7436558 | 32515.2 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN04488505_111130 | Not Available | + | 7436807 - 7438009 | 45374.0 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488505_111131 | Not Available | - | 7438130 - 7439335 | 42893.0 |
| histidine kinase | SAMN04488505_111132 | Not Available | + | 7439599 - 7441086 | 57229.5 |
| protein of unknown function | SAMN04488505_111133 | Not Available | + | 7441097 - 7442077 | 37227.2 |
| two component transcriptional regulator, lyttr family | SAMN04488505_111134 | Not Available | + | 7442074 - 7442781 | 26638.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.