Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| membrane-bound lytic murein transglycosylase d | SAMN04488505_111105 | Not Available | - | 7410259 - 7411569 | 47999.7 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit a | SAMN04488505_111106 | Not Available | - | 7411583 - 7413037 | 52582.5 |
| sec-independent protein translocase protein tata | SAMN04488505_111107 | Not Available | - | 7413168 - 7413401 | 8568.77 |
| large subunit ribosomal protein l19 | SAMN04488505_111108 | Not Available | - | 7413591 - 7413938 | 13018.0 |
| trna (guanine37-n(1)-) methyltransferase | SAMN04488505_111109 | Not Available | - | 7414161 - 7414835 | 25253.5 |
| 16s rrna processing protein rimm | SAMN04488505_111110 | Not Available | - | 7414987 - 7415508 | 19237.7 |
| ssu ribosomal protein s16p | SAMN04488505_111111 | Not Available | - | 7415590 - 7416027 | 16514.1 |
| signal recognition particle subunit ffh/srp54 (srp54) | SAMN04488505_111112 | Not Available | - | 7416224 - 7417549 | 48582.3 |
| rna polymerase primary sigma factor | SAMN04488505_111113 | Not Available | - | 7417779 - 7418654 | 33170.7 |
| hypothetical protein | SAMN04488505_111114 | Not Available | + | 7419019 - 7419399 | 15006.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.