Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488505_11175 | Not Available | - | 7376050 - 7376784 | 25774.1 |
| 4-oxalocrotonate tautomerase | SAMN04488505_11176 | Not Available | - | 7376848 - 7377066 | 8190.84 |
| polyisoprenoid-binding protein ycei | SAMN04488505_11177 | Not Available | - | 7377077 - 7377613 | 19299.7 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488505_11178 | Not Available | - | 7377723 - 7378295 | 22047.5 |
| hypothetical protein | SAMN04488505_11179 | Not Available | - | 7378339 - 7379073 | 27471.6 |
| hypothetical protein | SAMN04488505_11180 | Not Available | - | 7379078 - 7380058 | 37101.9 |
| hypothetical protein | SAMN04488505_11181 | Not Available | - | 7380113 - 7380436 | 11659.9 |
| hypothetical protein | SAMN04488505_11182 | Not Available | + | 7380664 - 7382514 | 71071.1 |
| hypothetical protein | SAMN04488505_11183 | Not Available | - | 7382593 - 7383312 | 27394.3 |
| tonb-dependent siderophore receptor | SAMN04488505_11184 | Not Available | + | 7383548 - 7385899 | 86455.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.