Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04488505_11135 | Not Available | - | 7340662 - 7341339 | 26035.4 |
| hypothetical protein | SAMN04488505_11136 | Not Available | - | 7341344 - 7342204 | 31618.6 |
| hypothetical protein | SAMN04488505_11137 | Not Available | - | 7342219 - 7342548 | 11977.3 |
| hypothetical protein | SAMN04488505_11138 | Not Available | - | 7342603 - 7343130 | 17295.4 |
| nucleoside-diphosphate-sugar epimerase | SAMN04488505_11139 | Not Available | + | 7343318 - 7344208 | 31497.5 |
| nucleoside-diphosphate-sugar epimerase | SAMN04488505_11140 | Not Available | + | 7344214 - 7345134 | 33534.3 |
| arac-type dna-binding protein | SAMN04488505_11141 | Not Available | + | 7345148 - 7346074 | 35274.1 |
| c-terminal processing protease ctpa/prc, contains a pdz domain | SAMN04488505_11142 | Not Available | - | 7346156 - 7347847 | 62763.6 |
| doxx-like family protein | SAMN04488505_11143 | Not Available | + | 7348043 - 7348453 | 15136.8 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04488505_11144 | Not Available | - | 7348614 - 7349402 | 27683.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.