Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate decarboxylase | SAMN04488505_11115 | Not Available | - | 7319676 - 7320902 | 46112.5 |
| heat shock protein hsp15 | SAMN04488505_11116 | Not Available | - | 7321060 - 7321467 | 15612.6 |
| acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase | SAMN04488505_11117 | Not Available | - | 7321563 - 7322936 | 50669.4 |
| sigma-70 region 2 | SAMN04488505_11118 | Not Available | + | 7323298 - 7323747 | 17426.9 |
| fecr family protein | SAMN04488505_11119 | Not Available | + | 7323778 - 7325022 | 46312.2 |
| response regulator receiver domain-containing protein | SAMN04488505_11120 | Not Available | - | 7325041 - 7325505 | 18034.8 |
| lema protein | SAMN04488505_11121 | Not Available | + | 7325830 - 7326408 | 21236.3 |
| tlp18.3, psb32 and molo-1 founding protein of phosphatase | SAMN04488505_11122 | Not Available | + | 7326583 - 7327038 | 17412.9 |
| uncharacterized protein | SAMN04488505_11123 | Not Available | + | 7327083 - 7327817 | 24925.8 |
| hypothetical protein | SAMN04488505_11124 | Not Available | + | 7327849 - 7328802 | 36853.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.