Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase, sigma subunit, ecf family | SAMN04488505_110244 | Not Available | - | 7289880 - 7290461 | 22158.5 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488505_110245 | Not Available | - | 7290496 - 7293447 | 108316.0 |
| hypothetical protein | SAMN04488505_110246 | Not Available | - | 7294101 - 7295291 | 46442.9 |
| arac family transcriptional regulator | SAMN04488505_110247 | Not Available | + | 7295619 - 7296425 | 30736.7 |
| putative acetyltransferase | SAMN04488505_110248 | Not Available | + | 7296568 - 7297005 | 16159.5 |
| uncharacterized conserved protein, duf885 familyt | SAMN04488505_110249 | Not Available | + | 7297014 - 7298795 | 67381.0 |
| integrase core domain-containing protein | SAMN04488505_110250 | Not Available | - | 7299015 - 7299240 | 8516.34 |
| trna pseudouridine38-40 synthase | SAMN04488505_1112 | Not Available | - | 7300331 - 7301089 | 28721.6 |
| protein of unknown function | SAMN04488505_1113 | Not Available | - | 7301086 - 7302732 | 58506.9 |
| biotin carboxyl carrier protein | SAMN04488505_1114 | Not Available | - | 7302809 - 7303306 | 17795.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.