Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN04488505_110164 | Not Available | - | 7189628 - 7191412 | 67320.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_110165 | Not Available | - | 7191438 - 7194776 | 122043.0 |
| fecr family protein | SAMN04488505_110166 | Not Available | - | 7194895 - 7195881 | 36305.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_110167 | Not Available | - | 7195984 - 7196544 | 21608.6 |
| hypothetical protein | SAMN04488505_110168 | Not Available | - | 7196658 - 7197386 | 26903.9 |
| enterochelin esterase | SAMN04488505_110169 | Not Available | - | 7197491 - 7199410 | 71043.5 |
| beta-glucosidase | SAMN04488505_110170 | Not Available | - | 7199457 - 7201994 | 93446.1 |
| helix-turn-helix domain-containing protein | SAMN04488505_110171 | Not Available | + | 7202509 - 7203390 | 34408.2 |
| alpha-n-acetylglucosaminidase | SAMN04488505_110172 | Not Available | - | 7203489 - 7205684 | 84238.7 |
| starch-binding associating with outer membrane | SAMN04488505_110173 | Not Available | - | 7205784 - 7207403 | 60130.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.