Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN04488505_110154 | Not Available | + | 7171456 - 7172343 | 31005.3 |
| signal transduction histidine kinase | SAMN04488505_110155 | Not Available | + | 7172521 - 7175706 | 120484.0 |
| response regulator receiver modulated diguanylate cyclase | SAMN04488505_110156 | Not Available | + | 7175708 - 7176472 | 29230.4 |
| starch-binding associating with outer membrane | SAMN04488505_110157 | Not Available | - | 7176495 - 7178417 | 73069.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_110158 | Not Available | - | 7178458 - 7181748 | 123066.0 |
| rhamnogalacturonyl hydrolase yesr | SAMN04488505_110159 | Not Available | - | 7182178 - 7183281 | 42623.1 |
| superfamily i dna and/or rna helicase | SAMN04488505_110160 | Not Available | + | 7183480 - 7186518 | 114564.0 |
| methyltransferase domain-containing protein | SAMN04488505_110161 | Not Available | - | 7186532 - 7187170 | 24311.8 |
| uncharacterized zinc-type alcohol dehydrogenase-like protein | SAMN04488505_110162 | Not Available | - | 7187172 - 7188179 | 36788.5 |
| hypothetical protein | SAMN04488505_110163 | Not Available | - | 7188291 - 7189430 | 43107.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.