Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| suse outer membrane protein | SAMN04488505_110134 | Not Available | + | 7134965 - 7136110 | 41511.4 |
| glycosyl hydrolase family 76 | SAMN04488505_110135 | Not Available | + | 7136136 - 7137335 | 44955.9 |
| glycosyl hydrolase family 76 | SAMN04488505_110136 | Not Available | + | 7137339 - 7138556 | 46636.6 |
| fucose permease | SAMN04488505_110137 | Not Available | + | 7138562 - 7139740 | 42308.8 |
| snoal-like domain-containing protein | SAMN04488505_110138 | Not Available | - | 7139814 - 7140170 | 13654.2 |
| helix-turn-helix domain-containing protein | SAMN04488505_110139 | Not Available | - | 7140227 - 7140823 | 23077.1 |
| alpha-l-fucosidase | SAMN04488505_110140 | Not Available | - | 7140891 - 7142969 | 77987.1 |
| xylan 1,4-beta-xylosidase | SAMN04488505_110141 | Not Available | - | 7143015 - 7144610 | 59705.5 |
| beta-galactosidase | SAMN04488505_110142 | Not Available | - | 7144638 - 7146725 | 78485.1 |
| beta-galactosidase | SAMN04488505_110143 | Not Available | - | 7146744 - 7149206 | 91867.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.